Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906663.1_cds_XP_016456821.1_50619
CDS Infomation

[gene=LOC107780754] [db_xref=GeneID:107780754] [protein=inactive TPR repeat-containing thioredoxin TTL3-like] [protein_id=XP_016456821.1] [location=complement(join(92602..92784,93163..93669,93769..93964,94052..95001))] [gbkey=CDS]
Sequence

ATGGAAAAAACTAGAAGAAGTGATGAATCAACCATGTCTAAAAATGCAGATATTTCATTA
GAAAATGAATTGGGTTGTGGTCTAATGGGTGCTTTTTTTCCAAGAAAAAACTCTAAGCCA
AATACATCAACTATACCACCAATTCCAACCAAGATTAGTGACACCAATTCTGTCAAGAAT
TCAAGAAACGGGCGAAGCAGTTCTTGTGGTAAGGCATGTTTGGACTCCAGGAAATCAACT
AAGCCTTCACCGAAACTAGGTGACAAACCATTCAGAAAATCATCCTTAAATAGTTCGAGG
AATTCAAGTTCTTGTGAACAGAATAATATTAGAAGATCTTCATCAGATGGTACGAGAAAC
TCGAATAAAGCATCATCCAATTTTTCTAGTGTGACCAGGATGACACAAGTTGTGAACTTA
GCATACACACAAAAGCTTAGAAGAGAACCATCTTTTACCTCAACTGATTTGAGCATGACA
ATCTTTAGCCATCGAAAATCCAGGACAAATGGAACGTTGAATCGCGATTCAACAGGCAAT
GTTAGCCTATTAGACCACTTGGGAAATTTGAAGCTGCAGGGGAACCAAAATCCCTCTAGT
GACATAAAGAAAAAAGGCAGTGTTTTGATGGGAAACATAGTAAGACAACCTAGTGTAAGA
AGCCATCAATCCGGGAATACGTTTCGCCATTCTGCAAATAAACTAGACCCTGATGCACTC
AAGTCCATAGGCAATGAGCAGTATAGACAGGGAAAGTTTGAGGAAGCATTGGCTTTATAT
AATCAAGCAATTGAAATTGATCCAAAAAATGCTTGTTATTATAGCAACAAAAGTGCAGCT
TTGATGAGTTTAGGCCGCTTAATTGAAGCAGTGCTAGCATGCAGAGAGGCCATTCGGCTA
GATCCTTCTTATCACAATGCACATTTTCGTCTTGCAAGACTATACCTCAGACTAGGAGAT
GCAGAGAAAGCGATAGATCATTACAAACAATCAGGACAAAAAGTTGACAAGAAGGACATT
GCCGAGGCTCATGATCTTAAGCGACAAATCATAAAATGCACAGAAGCACAGAAACTGAGA
GATTACAACACATTGCTTAAGGAAACACATAATTCAATCTCCTTAGGAGCAAATTCAGCT
CCGCAGATCTTTGCCATGAGAGCTGAAGCCTTGTTGAAGTTACATAGACATGAGGAAGCA
TACACCACAATTCAGAATGGACCTGATTTTCAAACTAAGCTTTACACTAGCATTTTCGGT
ACAGAAAAAACAGCGTATTTATTAATCGTTCGAGCTGAGGCCTATGCAACTATAGGCAAG
TTTGAAGATGCCATGGTTGCAGCTCAAGAAGCAGTGAAATTGGATCAAAGCAATGAAGTA
ACTAACACAACTCTAAGGAGAATTAAAGGGTTGGTATCAGCTCGGTTAAAAGGCAATGAG
CTTTTCAAAGGAAATGAATTCTCAGAGGCTTGTTCCGTATACACTGAAGGACTAGAAAAA
GAGCCATACAATTCTGTTCTACTATTTAATAGAGCAGCTTGCCGATTCAAGCTAGGACAA
TTTGAAAGAGCAGTAGAAGATTGCACTGCAGCTCTTGTATTACGTCCTTCCTATGCAAAG
GCTAGACTGCGAAGAGCTGATTGCAACATCAAGTTGGAAAGATGGAAAGCAGCTATTCAA
GATTGTGAAGTGTTGATGCAAGAAAATTCAGAGGATGATGAAGCAAGTAGGGTGTTCTTA
GAGGCAAATGTTCAGCTTCAAAAGCAGCTAGTAGAGGACCATAACCAGAGTAATCTATTC
TACGGTTCCAACTCCGCGCTTGTCTCCGGCTACTAA

Peptide Sequence

PEP ID

XP_016456821.1
PEP Infomation

PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Nicotiana tabacum]
Sequence

MEKTRRSDESTMSKNADISLENELGCGLMGAFFPRKNSKPNTSTIPPIPTKISDTNSVKN
SRNGRSSSCGKACLDSRKSTKPSPKLGDKPFRKSSLNSSRNSSSCEQNNIRRSSSDGTRN
SNKASSNFSSVTRMTQVVNLAYTQKLRREPSFTSTDLSMTIFSHRKSRTNGTLNRDSTGN
VSLLDHLGNLKLQGNQNPSSDIKKKGSVLMGNIVRQPSVRSHQSGNTFRHSANKLDPDAL
KSIGNEQYRQGKFEEALALYNQAIEIDPKNACYYSNKSAALMSLGRLIEAVLACREAIRL
DPSYHNAHFRLARLYLRLGDAEKAIDHYKQSGQKVDKKDIAEAHDLKRQIIKCTEAQKLR
DYNTLLKETHNSISLGANSAPQIFAMRAEALLKLHRHEEAYTTIQNGPDFQTKLYTSIFG
TEKTAYLLIVRAEAYATIGKFEDAMVAAQEAVKLDQSNEVTNTTLRRIKGLVSARLKGNE
LFKGNEFSEACSVYTEGLEKEPYNSVLLFNRAACRFKLGQFERAVEDCTAALVLRPSYAK
ARLRRADCNIKLERWKAAIQDCEVLMQENSEDDEASRVFLEANVQLQKQLVEDHNQSNLF
YGSNSALVSGY

Transcript Sequence

Gene sequence data has not been registered.